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Orange rivers signal toxic shift in Arctic wilderness

by | Sep 10, 2025 | Earth Science

The Salmon River in Alaska now runs a rusty orange thanks to metal contaminants unleashed by thawing permafrost. Credit: Taylor Rhoades.

New research from the USA has found that warming soil unleashes metals deadly to fish and food chains and turns rivers orange.

In Alaska’s Brooks Range, rivers once clear enough to drink now run orange and hazy with toxic metals.

As warming thaws formerly frozen ground, it sets off a chemical chain reaction that is poisoning fish and wreaking havoc on ecosystems.

As the planet warms, a layer of permafrost — permanently frozen Arctic soil that locked away minerals for millennia — is beginning to thaw.

Water and oxygen creep into the newly exposed soil, triggering the breakdown of sulfide-rich rocks, and creating sulfuric acid that leaches naturally occurring metals like iron, cadmium, and aluminium from rocks into the river. 

Often, geochemical reactions like these are triggered by mining operations, but that is not the case this time. 

Tim Lyons, a biogeochemist at the University of California, Riverside, said: “This is what acid mine drainage looks like, but here, there’s no mine.

“The permafrost is thawing and changing the chemistry of the landscape.”

The Salmon River in better times. Credit: Patrick Sullivan/ University of Alaska.

“Like sewage”

A new paper has detailed the severity of the contamination and although the study focuses on the Salmon River, researchers warn that similar transformations are already underway across dozens of other Arctic watersheds. 

Co-author David Cooper, who is a Colorado State University research scientist, said: “I have worked and travelled in the Brooks Range since 1976, and the recent changes in landforms and water chemistry are truly astounding.”

Ecologist Paddy Sullivan of the University of Alaska first noticed the dramatic changes in 2019 while conducting fieldwork on Arctic forests shifting northward — another consequence of climate change.

A pilot flying Sullivan into the field warned him the Salmon River hadn’t cleared up after the snowmelt and looked “like sewage.”

Alarmed by what he saw, Sullivan joined forces with Lyons, Roman Dial from Alaska Pacific University, and others to investigate the causes and ecological consequences.

Their analysis confirmed that thawing permafrost was unleashing geochemical reactions that oxidise sulfide-rich rocks like pyrite, generating acidity and mobilising a wide suite of metals, including cadmium, which accumulates in fish organs and could affect animals like bears and birds that eat fish.

Serious threats

In small amounts, metals aren’t necessarily toxic. However, the study shows that levels of metals in the river’s waters exceed US Environmental Protection Agency toxicity thresholds for aquatic life.

In addition, the iron-clouded waters reduce the amount of light reaching the bottom of the river and smother insect larvae eaten by the salmon and other fish.

While current metal concentrations in edible fish tissue are not considered hazardous to humans, the changes to the rivers pose indirect but serious threats.

Chum salmon, a key subsistence species for many Indigenous communities, might struggle to spawn in gravel beds choked with fine sediment. Other species, such as grayling and Dolly Varden, may also be affected.

Lyons said: “It’s not just a Salmon River story;  this is happening across the Arctic. Wherever you have the right kind of rock and thawing permafrost, this process can start.”

Unlike mine sites, where acid drainage can be mitigated with buffers or containment systems, these remote watersheds might have hundreds of contamination sources and no such infrastructure.

Once the chemical process begins, the only thing that can stop it is recovery of the permafrost.

Lyons said: “There’s no fixing this once it starts. It’s another irreversible shift driven by a warming planet.

“There are few places left on Earth as untouched as these rivers, but even here, far from cities and highways, the fingerprint of global warming is unmistakable.

“No place is spared.”

The study is published in Proceedings of the National Academy of Sciences.

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